Atoms Are Too Close, Please Check your Geometry Input

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Just Got Here

6:36:26 PM PDT - Wed, Apr 25th 2018
@Edoapara Thank you for the clarification about autosym. Do you have any suggestions on how I may avoid those state of affairs that you mentioned. I'm not sure how to, given that that's the geometrical structure of the protein I'm trying to work with. Thank you!