Output generated from ' print "final vectors analysis" ' does not appear to be normalised


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The molecular orbitals are orthonormal
Jon,
While the eigenvectors are not orthonormal, the molecular orbitals are orthonormal, instead.
Using this property, you can derive that the following product is equal to the identity

C(transpose)*S*C=I

(where C is the Eigenvector matrix, S the Overlap Matrix)